Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFT2D1SFT2 domain containing 1. (138 aa)    
Predicted Functional Partners:
GOLT1B
Golgi transport 1B.
   
 
 0.932
YKT6
YKT6 v-SNARE homolog.
    
 
 0.931
STX5
Syntaxin 5.
    
 
 0.887
COG6
Component of oligomeric golgi complex 6.
    
   0.870
ENSVPAP00000003707
annotation not available
    
   0.782
P4HA1
Prolyl 4-hydroxylase subunit alpha 1.
      
 0.753
C1orf112
Chromosome 1 open reading frame 112.
    
   0.696
ENSVPAP00000005356
annotation not available
    
   0.696
GUCY1A2
Guanylate cyclase 1 soluble subunit alpha 2.
    
   0.696
TRAPPC3L
Trafficking protein particle complex 3 like.
   
  
 0.692
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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