Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MS4A5Membrane spanning 4-domains A5. (170 aa)    
Predicted Functional Partners:
MS4A3
Membrane spanning 4-domains A3.
   
  
 0.920
ENSVPAP00000006936
annotation not available
   
  
 0.860
MS4A12
Membrane spanning 4-domains A12.
   
  
 0.809
AQP4
Aquaporin 4.
   
  
 0.791
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
      
 0.764
ENSVPAP00000008503
annotation not available
      
 0.678
MS4A2
Membrane spanning 4-domains A2.
      
 0.670
ENSVPAP00000001557
annotation not available
   
  
 0.665
ENSVPAP00000000575
annotation not available
   
    0.649
GUCY2F
Guanylate cyclase 2F, retinal.
      
 0.615
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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