MS4A12 protein (Vicugna pacos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

MS4A12

Membrane spanning 4-domains A12. (268 aa)

Predicted Functional Partners:

MS4A5

0.809

ENSVPAP00000001556

0.700

ENSVPAP00000001557

0.620

ENSVPAP00000003667

0.608

ENSVPAP00000000741

0.485

PLLP

0.476

ENSVPAP00000004694

0.451

ENSVPAP00000000020

0.434

ENSVPAP00000003284

0.434

SLC9A2

0.431

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVPAP00000000020	MS4A12	ENSVPAP00000000020	ENSVPAP00000001563	annotation not available	Membrane spanning 4-domains A12.	0.434
ENSVPAP00000000741	MS4A12	ENSVPAP00000000741	ENSVPAP00000001563	annotation not available	Membrane spanning 4-domains A12.	0.485
ENSVPAP00000001556	ENSVPAP00000001557	ENSVPAP00000001556	ENSVPAP00000001557	annotation not available	annotation not available	0.692
ENSVPAP00000001556	MS4A12	ENSVPAP00000001556	ENSVPAP00000001563	annotation not available	Membrane spanning 4-domains A12.	0.700
ENSVPAP00000001556	MS4A5	ENSVPAP00000001556	ENSVPAP00000001560	annotation not available	Membrane spanning 4-domains A5.	0.448
ENSVPAP00000001557	ENSVPAP00000001556	ENSVPAP00000001557	ENSVPAP00000001556	annotation not available	annotation not available	0.692
ENSVPAP00000001557	MS4A12	ENSVPAP00000001557	ENSVPAP00000001563	annotation not available	Membrane spanning 4-domains A12.	0.620
ENSVPAP00000001557	MS4A5	ENSVPAP00000001557	ENSVPAP00000001560	annotation not available	Membrane spanning 4-domains A5.	0.665
ENSVPAP00000003284	MS4A12	ENSVPAP00000003284	ENSVPAP00000001563	annotation not available	Membrane spanning 4-domains A12.	0.434
ENSVPAP00000003667	MS4A12	ENSVPAP00000003667	ENSVPAP00000001563	annotation not available	Membrane spanning 4-domains A12.	0.608
ENSVPAP00000004694	MS4A12	ENSVPAP00000004694	ENSVPAP00000001563	annotation not available	Membrane spanning 4-domains A12.	0.451
MS4A12	ENSVPAP00000000020	ENSVPAP00000001563	ENSVPAP00000000020	Membrane spanning 4-domains A12.	annotation not available	0.434
MS4A12	ENSVPAP00000000741	ENSVPAP00000001563	ENSVPAP00000000741	Membrane spanning 4-domains A12.	annotation not available	0.485
MS4A12	ENSVPAP00000001556	ENSVPAP00000001563	ENSVPAP00000001556	Membrane spanning 4-domains A12.	annotation not available	0.700
MS4A12	ENSVPAP00000001557	ENSVPAP00000001563	ENSVPAP00000001557	Membrane spanning 4-domains A12.	annotation not available	0.620
MS4A12	ENSVPAP00000003284	ENSVPAP00000001563	ENSVPAP00000003284	Membrane spanning 4-domains A12.	annotation not available	0.434
MS4A12	ENSVPAP00000003667	ENSVPAP00000001563	ENSVPAP00000003667	Membrane spanning 4-domains A12.	annotation not available	0.608
MS4A12	ENSVPAP00000004694	ENSVPAP00000001563	ENSVPAP00000004694	Membrane spanning 4-domains A12.	annotation not available	0.451
MS4A12	MS4A5	ENSVPAP00000001563	ENSVPAP00000001560	Membrane spanning 4-domains A12.	Membrane spanning 4-domains A5.	0.809
MS4A12	PLLP	ENSVPAP00000001563	ENSVPAP00000005546	Membrane spanning 4-domains A12.	Plasmolipin.	0.476