Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB21RAB21, member RAS oncogene family. (172 aa)    
Predicted Functional Partners:
ENSVPAP00000005668
annotation not available
    
 0.979
RAB22A
RAB22A, member RAS oncogene family.
   
 0.938
STAM
Signal transducing adaptor molecule.
    
   0.914
SBF2
SET binding factor 2.
    
 0.867
CHM
CHM Rab escort protein.
     
 0.834
ENSVPAP00000011211
annotation not available
    
 0.827
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
 0.792
EEA1
Early endosome antigen 1.
    
 
 0.783
ENSVPAP00000009858
annotation not available
   
 0.767
ENSVPAP00000006027
annotation not available
      
 0.754
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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