Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM126ATransmembrane protein 126A. (196 aa)    
Predicted Functional Partners:
ECSIT
ECSIT signaling integrator.
     
 0.945
ENSVPAP00000011172
annotation not available
      
 0.851
OXA1L
OXA1L mitochondrial inner membrane protein.
     
 0.788
TMEM109
Transmembrane protein 109.
      
 0.769
DHRS7
Dehydrogenase/reductase 7.
      
 0.717
AASDHPPT
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
   
  
 0.711
APOO
Apolipoprotein O.
   
   0.709
ENSVPAP00000010494
annotation not available
   
  
 0.698
RTN4IP1
Reticulon 4 interacting protein 1.
   
  
 0.691
METTL17
Methyltransferase like 17.
      
 0.683
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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