ENSVPAP00000001587 protein (Vicugna pacos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSVPAP00000001587

annotation not available (413 aa)

Predicted Functional Partners:

ENSVPAP00000011647

0.859

SPAG9

0.767

MPHOSPH6

0.689

IQCF1

0.689

ARID4A

0.675

DMRTC2

0.665

CDADC1

0.635

IQCG

0.634

EIF4ENIF1

0.615

KLHL10

0.606

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	CDADC1	ENSVPAP00000003381	ENSVPAP00000011179	AT-rich interaction domain 4A.	Cytidine and dCMP deaminase domain containing 1.	0.615
ARID4A	DMRTC2	ENSVPAP00000003381	ENSVPAP00000002957	AT-rich interaction domain 4A.	DMRT like family C2.	0.440
ARID4A	EIF4ENIF1	ENSVPAP00000003381	ENSVPAP00000009528	AT-rich interaction domain 4A.	Eukaryotic translation initiation factor 4E nuclear import factor 1.	0.777
ARID4A	ENSVPAP00000001587	ENSVPAP00000003381	ENSVPAP00000001587	AT-rich interaction domain 4A.	annotation not available	0.675
ARID4A	IQCG	ENSVPAP00000003381	ENSVPAP00000003582	AT-rich interaction domain 4A.	IQ motif containing G.	0.503
CDADC1	ARID4A	ENSVPAP00000011179	ENSVPAP00000003381	Cytidine and dCMP deaminase domain containing 1.	AT-rich interaction domain 4A.	0.615
CDADC1	DMRTC2	ENSVPAP00000011179	ENSVPAP00000002957	Cytidine and dCMP deaminase domain containing 1.	DMRT like family C2.	0.591
CDADC1	EIF4ENIF1	ENSVPAP00000011179	ENSVPAP00000009528	Cytidine and dCMP deaminase domain containing 1.	Eukaryotic translation initiation factor 4E nuclear import factor 1.	0.528
CDADC1	ENSVPAP00000001587	ENSVPAP00000011179	ENSVPAP00000001587	Cytidine and dCMP deaminase domain containing 1.	annotation not available	0.635
CDADC1	IQCG	ENSVPAP00000011179	ENSVPAP00000003582	Cytidine and dCMP deaminase domain containing 1.	IQ motif containing G.	0.554
DMRTC2	ARID4A	ENSVPAP00000002957	ENSVPAP00000003381	DMRT like family C2.	AT-rich interaction domain 4A.	0.440
DMRTC2	CDADC1	ENSVPAP00000002957	ENSVPAP00000011179	DMRT like family C2.	Cytidine and dCMP deaminase domain containing 1.	0.591
DMRTC2	ENSVPAP00000001587	ENSVPAP00000002957	ENSVPAP00000001587	DMRT like family C2.	annotation not available	0.665
DMRTC2	IQCF1	ENSVPAP00000002957	ENSVPAP00000010608	DMRT like family C2.	IQ motif containing F1.	0.547
DMRTC2	IQCG	ENSVPAP00000002957	ENSVPAP00000003582	DMRT like family C2.	IQ motif containing G.	0.473
DMRTC2	KLHL10	ENSVPAP00000002957	ENSVPAP00000011086	DMRT like family C2.	Kelch like family member 10.	0.413
EIF4ENIF1	ARID4A	ENSVPAP00000009528	ENSVPAP00000003381	Eukaryotic translation initiation factor 4E nuclear import factor 1.	AT-rich interaction domain 4A.	0.777
EIF4ENIF1	CDADC1	ENSVPAP00000009528	ENSVPAP00000011179	Eukaryotic translation initiation factor 4E nuclear import factor 1.	Cytidine and dCMP deaminase domain containing 1.	0.528
EIF4ENIF1	ENSVPAP00000001587	ENSVPAP00000009528	ENSVPAP00000001587	Eukaryotic translation initiation factor 4E nuclear import factor 1.	annotation not available	0.615
EIF4ENIF1	IQCG	ENSVPAP00000009528	ENSVPAP00000003582	Eukaryotic translation initiation factor 4E nuclear import factor 1.	IQ motif containing G.	0.514