STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EBF1EBF transcription factor 1. (589 aa)    
Predicted Functional Partners:
LHX9
LIM homeobox 9.
   
 
 0.737
ZNF521
Zinc finger protein 521.
   
 0.675
SCD5
stearoyl-CoA desaturase 5.
   
 
 0.668
SCD
stearoyl-CoA desaturase.
   
 
 0.668
ENSVPAP00000009826
annotation not available
    
 
 0.666
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
     
 0.637
PLAA
Phospholipase A2 activating protein.
    
   0.635
YOD1
YOD1 deubiquitinase.
    
   0.635
ETV3
ETS variant transcription factor 3.
      
 0.626
ETV6
ETS variant transcription factor 6.
      
 0.591
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.