Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001600annotation not available (423 aa)    
Predicted Functional Partners:
TDRD3
Tudor domain containing 3.
    
 
 0.932
RPS2
Ribosomal protein S2.
   
 0.886
PRMT3
Protein arginine methyltransferase 3.
    
 
 0.865
ESR1
Estrogen receptor 1.
    
 0.836
NHP2
NHP2 ribonucleoprotein.
   
 0.777
LSM14A
LSM14A mRNA processing body assembly factor.
    
   0.776
FASLG
Fas ligand.
    
   0.774
PRMT5
Protein arginine methyltransferase 5.
   
 0.757
GAR1
GAR1 ribonucleoprotein.
   
 
 0.750
BYSL
Bystin like.
   
 0.723
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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