Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGM6Transglutaminase 6. (706 aa)    
Predicted Functional Partners:
EDA2R
Ectodysplasin A2 receptor.
      
 0.704
ENSVPAP00000002724
annotation not available
    
 
 0.692
ENSVPAP00000005373
annotation not available
      
 0.691
ATXN10
Ataxin 10.
      
 0.691
SEMA3A
Semaphorin 3A.
      
 0.676
RHOBTB3
Rho related BTB domain containing 3.
    
 0.659
ENSVPAP00000000518
annotation not available
      
 0.653
PLEKHG7
Pleckstrin homology and RhoGEF domain containing G7.
     
 0.634
ENSVPAP00000003109
annotation not available
    
   0.631
ENSVPAP00000003438
annotation not available
   
 0.625
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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