Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GKN2Gastrokine 2. (182 aa)    
Predicted Functional Partners:
GKN1
Gastrokine 1.
   
  
 0.981
ENSVPAP00000002758
annotation not available
      
 0.721
ATP12A
ATPase H+/K+ transporting non-gastric alpha2 subunit.
   
  
 0.624
ANKFN1
Ankyrin repeat and fibronectin type III domain containing 1.
      
 0.552
ENO4
Enolase 4.
      
 0.530
PI16
Peptidase inhibitor 16.
      
 0.525
TNMD
Tenomodulin.
      
 0.524
ITM2B
Integral membrane protein 2B.
      
 0.524
ENSVPAP00000010894
annotation not available
      
 0.522
ENSVPAP00000010503
annotation not available
      
 0.518
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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