Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP133Nucleoporin 133. (1154 aa)    
Predicted Functional Partners:
NUP107
Nucleoporin 107.
   
 0.999
NUP37
Nucleoporin 37.
   
 0.999
SEH1L
SEH1 like nucleoporin.
   
 0.999
NUP43
Nucleoporin 43.
   
 0.999
NUP160
Nucleoporin 160.
   
 0.999
NUP98
Nucleoporin 98.
   
 0.999
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.999
NUP85
Nucleoporin 85.
   
 0.999
NUP155
Nucleoporin 155.
   
 0.998
NUP205
Nucleoporin 205.
   
 0.998
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.