Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001615annotation not available (457 aa)    
Predicted Functional Partners:
MSH4
mutS homolog 4.
   
 0.998
MLH3
mutL homolog 3.
  
 0.983
MLH1
mutL homolog 1.
  
 0.949
PMS1
PMS1 homolog 1, mismatch repair system component.
  
 0.903
BLM
BLM RecQ like helicase.
  
 0.864
MND1
Meiotic nuclear divisions 1.
   
  
 0.833
RAD51
RAD51 recombinase.
   
 0.830
FANCM
FA complementation group M.
    
 
 0.824
EXO1
Exonuclease 1.
   
 0.809
DMC1
DNA meiotic recombinase 1.
   
 0.762
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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