STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TLE1TLE family member 1, transcriptional corepressor. (518 aa)    
Predicted Functional Partners:
TBX20
T-box transcription factor 20.
    
 
 0.977
LEF1
Lymphoid enhancer binding factor 1.
    
 0.970
ENSVPAP00000005766
annotation not available
    
 
 0.965
TLE4
TLE family member 4, transcriptional corepressor.
   
 0.962
ENSVPAP00000000650
annotation not available
    
 0.961
HDAC2
Histone deacetylase 2.
    
 0.939
ENSVPAP00000007594
annotation not available
    
 0.937
RUNX2
RUNX family transcription factor 2.
    
 
 0.910
XIAP
X-linked inhibitor of apoptosis.
    
  0.893
ENSVPAP00000010202
annotation not available
    
 0.829
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.