Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALKBH1alkB homolog 1, histone H2A dioxygenase. (388 aa)    
Predicted Functional Partners:
ALKBH5
alkB homolog 5, RNA demethylase.
      
 0.923
ENSVPAP00000010881
annotation not available
      
 0.923
ALKBH3
alkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
      
 0.922
ENSVPAP00000011743
annotation not available
   
  
 0.866
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.856
ALKBH8
alkB homolog 8, tRNA methyltransferase.
      
 0.821
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.730
TRMT6
tRNA methyltransferase 6.
   
  
 0.714
TRMT61B
tRNA methyltransferase 61B.
     
 0.693
NSUN3
NOP2/Sun RNA methyltransferase 3.
      
 0.692
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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