Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNW1SNW domain containing 1. (531 aa)    
Predicted Functional Partners:
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.998
BUD31
BUD31 homolog.
   
 0.998
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.998
RBM22
RNA binding motif protein 22.
   
 0.997
PPIE
Peptidylprolyl isomerase E.
   
 0.997
ENSVPAP00000011765
annotation not available
    
 0.996
ENSVPAP00000011570
annotation not available
    
 0.989
SYF2
SYF2 pre-mRNA splicing factor.
   
 
 0.987
CWC15
CWC15 spliceosome associated protein homolog.
   
 
 0.987
ENSVPAP00000005509
annotation not available
    
 0.987
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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