Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001646annotation not available (1349 aa)    
Predicted Functional Partners:
ENSVPAP00000008318
annotation not available
   
 0.896
ENSVPAP00000004919
annotation not available
    
 0.731
ENSVPAP00000006343
annotation not available
    
 0.731
C4BPB
Complement component 4 binding protein beta.
   
 
 0.730
TNC
Tenascin C.
    
  0.635
TNN
Tenascin N.
    
  0.635
TNR
Tenascin R.
    
  0.635
ENSVPAP00000009159
annotation not available
   
 0.593
MASP1
Mannan binding lectin serine peptidase 1.
    
 0.573
C5
Complement C5.
   
 0.520
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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