Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NCLNucleolin. (703 aa)    
Predicted Functional Partners:
NPM1
Nucleophosmin 1.
   
 
 0.993
RPL29
Ribosomal protein L29.
   
  0.948
RPL3
Ribosomal protein L3.
   
 0.948
LARP7
La ribonucleoprotein 7, transcriptional regulator.
    
 0.924
SERBP1
SERPINE1 mRNA binding protein 1.
   
 
 0.920
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.901
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.897
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 
 0.888
TOP1
DNA topoisomerase I.
   
 
 0.876
NOP58
NOP58 ribonucleoprotein.
   
 0.871
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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