Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM221AFamily with sequence similarity 221 member A. (253 aa)    
Predicted Functional Partners:
SNX2
Sorting nexin 2.
    
   0.916
SNX1
Sorting nexin 1.
    
   0.712
MGAT4C
MGAT4 family member C.
   
  
 0.704
RPS6KA5
Ribosomal protein S6 kinase A5.
      
 0.609
SNX6
Sorting nexin 6.
    
   0.578
SNX32
Sorting nexin 32.
    
   0.578
SPON1
Spondin 1.
     
 0.566
ENSVPAP00000007195
annotation not available
      
 0.550
STRIP2
Striatin interacting protein 2.
      
 0.521
TLCD4
TLC domain containing 4.
      
 0.519
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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