Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HAT1Histone acetyltransferase 1. (419 aa)    
Predicted Functional Partners:
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.993
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.987
ENSVPAP00000011053
annotation not available
   
 0.987
NASP
Nuclear autoantigenic sperm protein.
   
 
 0.986
LOC102528314
Histone H4.
    
 0.982
BAP1
BRCA1 associated protein 1.
   
 
 0.969
LOC102532015
Histone H3.
    
 0.959
ENSVPAP00000007649
annotation not available
    
 0.959
LOC102530534
Histone H3.3.
    
 0.959
ORC3
Origin recognition complex subunit 3.
   
 
 0.937
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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