Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGA6Integrin subunit alpha 6. (1068 aa)    
Predicted Functional Partners:
ITGB1
Integrin subunit beta 1.
   
 0.999
CD9
CD9 molecule.
   
 0.969
LAMA3
Laminin subunit alpha 3.
    
 0.952
ENSVPAP00000003830
annotation not available
   
 0.952
ENSVPAP00000006872
annotation not available
   
 0.903
ENSVPAP00000004726
annotation not available
   
 0.882
LAMA4
Laminin subunit alpha 4.
    
 0.879
ITGB6
Integrin subunit beta 6.
   
 0.858
ITGB8
Integrin subunit beta 8.
    
 0.797
ITGA2
Integrin subunit alpha 2.
   
 0.781
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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