Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001718annotation not available (817 aa)    
Predicted Functional Partners:
RHOA
Ras homolog family member A.
   
 0.985
PFN4
Profilin family member 4.
    
 0.962
PFN1
Profilin 1.
    
 0.952
ENSVPAP00000006432
annotation not available
   
 0.925
DIAPH2
Diaphanous related formin 2.
     
 
0.924
RHOB
Ras homolog family member B.
   
 0.789
RND3
Rho family GTPase 3.
   
 0.788
WASF1
WASP family member 1.
     
 0.775
ANLN
Anillin actin binding protein.
   
 
 0.738
RHOBTB1
Rho related BTB domain containing 1.
   
 0.711
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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