Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPKHeterogeneous nuclear ribonucleoprotein K. (464 aa)    
Predicted Functional Partners:
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.999
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.999
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.995
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.995
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.995
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.995
ENSVPAP00000005949
annotation not available
   
 0.995
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.995
HNRNPC
Heterogeneous nuclear ribonucleoprotein C.
   
 0.993
PTBP3
Polypyrimidine tract binding protein 3.
   
 0.990
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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