Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001720annotation not available (258 aa)    
Predicted Functional Partners:
GPS2
G protein pathway suppressor 2.
    
 0.996
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.989
KDM1A
Lysine demethylase 1A.
   
 0.981
MYC
MYC proto-oncogene, bHLH transcription factor.
    
 
 0.977
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.974
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
   
 0.967
GTF2I
General transcription factor IIi.
    
 
 0.967
ENSVPAP00000010815
annotation not available
   
 0.967
ENSVPAP00000003746
annotation not available
    
 
 0.964
CREBBP
CREB binding protein.
    
 0.961
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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