Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMI1RecQ mediated genome instability 1. (625 aa)    
Predicted Functional Partners:
BLM
BLM RecQ like helicase.
   
 0.999
FANCM
FA complementation group M.
   
 0.991
ERCC6L
ERCC excision repair 6 like, spindle assembly checkpoint helicase.
    
 
 0.988
RPA3
Replication protein A3.
    
 0.986
RPA1
Replication protein A1.
    
 0.984
WRN
WRN RecQ like helicase.
    
 0.971
RAD51
RAD51 recombinase.
    
 0.927
RPA4
Replication protein A4.
    
 0.911
B2M
Beta-2-microglobulin.
    
 0.911
ENSVPAP00000003568
annotation not available
    
 0.900
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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