Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A2Solute carrier family 27 member 2. (459 aa)    
Predicted Functional Partners:
SLC27A6
Solute carrier family 27 member 6.
  
  
 
0.902
BBS9
Bardet-Biedl syndrome 9.
   
 0.852
BBS7
Bardet-Biedl syndrome 7.
    
 0.852
ENSVPAP00000011707
annotation not available
   
 0.849
BBS4
Bardet-Biedl syndrome 4.
    
 0.825
TTC8
Tetratricopeptide repeat domain 8.
    
 0.816
ACOX1
acyl-CoA oxidase 1.
   
 
 0.798
SCP2
Sterol carrier protein 2.
   
 
 0.735
ACSL3
acyl-CoA synthetase long chain family member 3.
    
 
 0.717
ACADL
acyl-CoA dehydrogenase long chain.
     
 0.717
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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