Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MARVELD2MARVEL domain containing 2. (559 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
    
 0.973
TUBAL3
Tubulin alpha like 3.
     
  0.900
LOC102527946
Tubulin alpha-1C chain-like.
     
  0.900
OCLN
Occludin.
 
 
0.794
CDK9
Cyclin dependent kinase 9.
    
 0.713
MARVELD3
MARVEL domain containing 3.
   
  
 0.705
ITCH
Itchy E3 ubiquitin protein ligase.
    
 
 0.677
ENSVPAP00000006079
annotation not available
      
 0.670
EAF2
ELL associated factor 2.
    
 0.668
ENSVPAP00000005405
annotation not available
    
 
 0.638
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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