STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHDRBS3KH RNA binding domain containing, signal transduction associated 3. (346 aa)    
Predicted Functional Partners:
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
   
   0.996
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.972
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
   0.966
PTBP2
Polypyrimidine tract binding protein 2.
   
 
 0.910
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 
 0.901
ENSVPAP00000002522
annotation not available
   
 
 0.850
GRB2
Growth factor receptor bound protein 2.
    
   0.787
RASA1
RAS p21 protein activator 1.
    
 
 0.783
ENSVPAP00000006078
annotation not available
   
 
 0.773
ENSVPAP00000002306
annotation not available
    
 0.769
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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