Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001754annotation not available (705 aa)    
Predicted Functional Partners:
MAB21L3
Mab-21 like 3.
    
   0.953
TOE1
Target of EGR1, exonuclease.
    
   0.848
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
    
   0.840
DYNLL1
Dynein light chain LC8-type 1.
    
   0.776
DYNLL2
Dynein light chain LC8-type 2.
    
   0.776
ENSVPAP00000007457
annotation not available
      
 0.687
DDX10
DEAD-box helicase 10.
   
  0.671
ENSVPAP00000000086
annotation not available
    
 
 0.630
RAE1
Ribonucleic acid export 1.
    
   0.628
DHX9
DExH-box helicase 9.
   
 0.623
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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