Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYOM1Myomesin 1. (1518 aa)    
Predicted Functional Partners:
LPIN2
Lipin 2.
 
  
 
 0.686
ENSVPAP00000000804
annotation not available
   
 0.612
ABLIM1
Actin binding LIM protein 1.
      
 0.606
ARID4A
AT-rich interaction domain 4A.
    
 0.589
ARID4B
AT-rich interaction domain 4B.
    
 0.589
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.587
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.578
CELF1
CUGBP Elav-like family member 1.
    
 
 0.576
ENSVPAP00000006553
annotation not available
    
 
 0.527
MYL1
Myosin light chain 1.
   
 
 0.511
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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