USP39 protein (Vicugna pacos) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

USP39

Ubiquitin specific peptidase 39. (563 aa)

Predicted Functional Partners:

SNRNP27

0.991

RBM42

0.979

EFTUD2

0.976

ENSVPAP00000005625

0.960

SNRNP40

0.948

PRPF3

0.948

PRPF4

0.933

ENSVPAP00000004485

0.921

LSM2

0.906

ENSVPAP00000006933

0.901

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFTUD2	ENSVPAP00000004485	ENSVPAP00000002545	ENSVPAP00000004485	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.957
EFTUD2	ENSVPAP00000005625	ENSVPAP00000002545	ENSVPAP00000005625	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.999
EFTUD2	ENSVPAP00000006933	ENSVPAP00000002545	ENSVPAP00000006933	Elongation factor Tu GTP binding domain containing 2.	annotation not available	0.971
EFTUD2	LSM2	ENSVPAP00000002545	ENSVPAP00000001623	Elongation factor Tu GTP binding domain containing 2.	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.965
EFTUD2	PRPF3	ENSVPAP00000002545	ENSVPAP00000005039	Elongation factor Tu GTP binding domain containing 2.	pre-mRNA processing factor 3.	0.988
EFTUD2	PRPF4	ENSVPAP00000002545	ENSVPAP00000004902	Elongation factor Tu GTP binding domain containing 2.	pre-mRNA processing factor 4.	0.994
EFTUD2	RBM42	ENSVPAP00000002545	ENSVPAP00000000019	Elongation factor Tu GTP binding domain containing 2.	RNA binding motif protein 42.	0.812
EFTUD2	SNRNP27	ENSVPAP00000002545	ENSVPAP00000001622	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein U4/U6.U5 subunit 27.	0.784
EFTUD2	SNRNP40	ENSVPAP00000002545	ENSVPAP00000003560	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein U5 subunit 40.	0.999
EFTUD2	USP39	ENSVPAP00000002545	ENSVPAP00000001774	Elongation factor Tu GTP binding domain containing 2.	Ubiquitin specific peptidase 39.	0.976
ENSVPAP00000004485	EFTUD2	ENSVPAP00000004485	ENSVPAP00000002545	annotation not available	Elongation factor Tu GTP binding domain containing 2.	0.957
ENSVPAP00000004485	ENSVPAP00000005625	ENSVPAP00000004485	ENSVPAP00000005625	annotation not available	annotation not available	0.968
ENSVPAP00000004485	ENSVPAP00000006933	ENSVPAP00000004485	ENSVPAP00000006933	annotation not available	annotation not available	0.970
ENSVPAP00000004485	LSM2	ENSVPAP00000004485	ENSVPAP00000001623	annotation not available	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
ENSVPAP00000004485	PRPF3	ENSVPAP00000004485	ENSVPAP00000005039	annotation not available	pre-mRNA processing factor 3.	0.980
ENSVPAP00000004485	PRPF4	ENSVPAP00000004485	ENSVPAP00000004902	annotation not available	pre-mRNA processing factor 4.	0.974
ENSVPAP00000004485	RBM42	ENSVPAP00000004485	ENSVPAP00000000019	annotation not available	RNA binding motif protein 42.	0.835
ENSVPAP00000004485	SNRNP27	ENSVPAP00000004485	ENSVPAP00000001622	annotation not available	Small nuclear ribonucleoprotein U4/U6.U5 subunit 27.	0.853
ENSVPAP00000004485	SNRNP40	ENSVPAP00000004485	ENSVPAP00000003560	annotation not available	Small nuclear ribonucleoprotein U5 subunit 40.	0.936
ENSVPAP00000004485	USP39	ENSVPAP00000004485	ENSVPAP00000001774	annotation not available	Ubiquitin specific peptidase 39.	0.921