Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001778annotation not available (134 aa)    
Predicted Functional Partners:
ENSVPAP00000004962
annotation not available
    
  0.828
MYO6
Myosin VI.
    
 
 0.758
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
  0.704
ENSVPAP00000004519
annotation not available
    
 
 0.696
PITPNB
Phosphatidylinositol transfer protein beta.
    
 
 0.659
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
    
 
 0.655
RBBP6
RB binding protein 6, ubiquitin ligase.
      
 0.644
PTPRM
Protein tyrosine phosphatase receptor type M.
    
 0.641
ENSVPAP00000011634
annotation not available
    
 0.641
TMTC4
Transmembrane O-mannosyltransferase targeting cadherins 4.
    
 
 0.633
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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