Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IMMP1LInner mitochondrial membrane peptidase subunit 1. (166 aa)    
Predicted Functional Partners:
ENSVPAP00000001323
annotation not available
    
 0.887
SPCS2
Signal peptidase complex subunit 2.
   
 0.886
IMMP2L
Inner mitochondrial membrane peptidase subunit 2.
  
 
0.877
SPCS1
Signal peptidase complex subunit 1.
   
 0.876
WDR59
WD repeat domain 59.
    
 0.840
ENSVPAP00000007111
annotation not available
    
 0.833
LIG4
DNA ligase 4.
   
 0.779
DNAJC24
DnaJ heat shock protein family (Hsp40) member C24.
  
 
 0.767
ENSVPAP00000005461
annotation not available
   
 0.736
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.719
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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