Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRIT1Leucine rich repeat, Ig-like and transmembrane domains 1. (582 aa)    
Predicted Functional Partners:
ENSVPAP00000002940
annotation not available
    
 0.915
NTNG1
Netrin G1.
    
 0.910
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.871
HABP2
Hyaluronan binding protein 2.
    
 0.870
FRMPD1
FERM and PDZ domain containing 1.
    
 
 0.867
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
   
 0.830
ENSVPAP00000003396
annotation not available
    
 0.827
DRC1
Dynein regulatory complex subunit 1.
    
   0.806
EFHB
EF-hand domain family member B.
    
   0.805
GPSM2
G protein signaling modulator 2.
    
 
 0.802
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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