Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNRGSynergin gamma. (1438 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
 0.991
AP1S2
Adaptor related protein complex 1 subunit sigma 2.
    
 
 0.978
AFTPH
Aftiphilin.
   
 
 0.978
AP1G1
Adaptor related protein complex 1 subunit gamma 1.
    
 0.965
ITSN1
Intersectin 1.
   
 0.955
ENTHD1
ENTH domain containing 1.
   
 0.917
TBC1D31
TBC1 domain family member 31.
    
  0.889
AP1S3
Adaptor related protein complex 1 subunit sigma 3.
    
 
 0.884
CLTC
Clathrin heavy chain.
   
 0.825
NECAP2
NECAP endocytosis associated 2.
    
 0.797
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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