Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NRBP1Nuclear receptor binding protein 1. (451 aa)    
Predicted Functional Partners:
ENSVPAP00000004685
annotation not available
    
 
 0.974
TSC22D3
TSC22 domain family member 3.
    
 
 0.968
ENSVPAP00000004885
annotation not available
    
 
 0.968
ELOC
Elongin C.
    
 
 0.967
CA10
Carbonic anhydrase 10.
    
   0.775
PROCA1
Protein interacting with cyclin A1.
      
 0.769
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
      
 0.692
STRA8
Stimulated by retinoic acid 8.
      
 0.691
IFT172
Intraflagellar transport 172.
      
 0.689
SAMD12
Sterile alpha motif domain containing 12.
      
 0.685
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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