STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASCL1Achaete-scute family bHLH transcription factor 1. (229 aa)    
Predicted Functional Partners:
ENSVPAP00000000650
annotation not available
   
 0.948
TCF12
Transcription factor 12.
   
 0.941
TCF4
Transcription factor 4.
   
 0.941
NEUROD4
Neuronal differentiation 4.
   
 
 0.787
NDRG1
N-myc downstream regulated 1.
      
 0.730
OLIG1
Oligodendrocyte transcription factor 1.
   
 
 0.726
ENSVPAP00000009845
annotation not available
   
  
 0.705
ENSVPAP00000000837
annotation not available
    
 
 0.699
ENSVPAP00000010901
annotation not available
   
 
 0.698
ENSVPAP00000000203
annotation not available
      
 0.687
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.