STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LIASLipoic acid synthetase. (372 aa)    
Predicted Functional Partners:
NFU1
NFU1 iron-sulfur cluster scaffold.
  
 0.996
KCNE3
Potassium voltage-gated channel subfamily E regulatory subunit 3.
  
 
 0.906
DLAT
Dihydrolipoamide S-acetyltransferase.
  
 
 0.865
FDX1
Ferredoxin 1.
    
 0.862
PDHX
Pyruvate dehydrogenase complex component X.
  
 
 0.803
DLST
Dihydrolipoamide S-succinyltransferase.
  
 
 0.778
ENSVPAP00000000865
annotation not available
  
  
 0.759
TTC6
Tetratricopeptide repeat domain 6.
      
 0.714
BOLA1
bolA family member 1.
   
 
 0.713
ISCA2
Iron-sulfur cluster assembly 2.
  
  
 0.707
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.