Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001871annotation not available (99 aa)    
Predicted Functional Partners:
RNF150
Ring finger protein 150.
      
 0.672
FAM114A1
Family with sequence similarity 114 member A1.
      
 0.659
RCC1L
RCC1 like.
      
 0.657
LIAS
Lipoic acid synthetase.
      
 0.645
SLPI
Secretory leukocyte peptidase inhibitor.
    
   0.630
N4BP2
NEDD4 binding protein 2.
      
 0.615
RFC1
Replication factor C subunit 1.
      
 0.615
TMEM156
Transmembrane protein 156.
      
 0.615
PDS5A
PDS5 cohesin associated factor A.
      
 0.615
NCBP2
Nuclear cap binding protein subunit 2.
      
 0.610
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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