Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001873annotation not available (380 aa)    
Predicted Functional Partners:
ENSVPAP00000000377
annotation not available
    
   0.777
CDC6
Cell division cycle 6.
    
 
 0.777
ORC3
Origin recognition complex subunit 3.
    
   0.777
ORC4
Origin recognition complex subunit 4.
    
   0.777
ORC2
Origin recognition complex subunit 2.
    
   0.777
MCM6
Minichromosome maintenance complex component 6.
    
   0.777
ORC5
Origin recognition complex subunit 5.
    
   0.777
MCM7
Minichromosome maintenance complex component 7.
    
   0.777
ENSVPAP00000009852
annotation not available
    
   0.777
ENSVPAP00000011213
annotation not available
    
   0.777
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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