Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TECPR2Tectonin beta-propeller repeat containing 2. (1112 aa)    
Predicted Functional Partners:
VPS41
VPS41 subunit of HOPS complex.
   
   0.965
ENSVPAP00000010664
annotation not available
    
 
 0.864
EPG5
Ectopic P-granules autophagy protein 5 homolog.
   
  
 0.712
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
   
 
 0.659
TRAPPC8
Trafficking protein particle complex 8.
      
 0.621
TRAPPC11
Trafficking protein particle complex 11.
      
 0.615
ENSVPAP00000008738
annotation not available
      
 0.615
SPG11
SPG11 vesicle trafficking associated, spatacsin.
   
  
 0.613
TRAPPC4
Trafficking protein particle complex 4.
      
 0.612
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.600
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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