Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001883annotation not available (276 aa)    
Predicted Functional Partners:
RIOK2
RIO kinase 2.
   
 0.999
ENSVPAP00000003549
annotation not available
   
 0.999
BYSL
Bystin like.
   
 0.999
PNO1
Partner of NOB1 homolog.
   
 0.999
TSR1
TSR1 ribosome maturation factor.
   
 0.998
ENSVPAP00000010070
annotation not available
   
 0.998
RPS5
Ribosomal protein S5.
   
 0.994
RPS3A
Ribosomal protein S3A.
   
  0.990
ENSVPAP00000010621
annotation not available
    
 0.989
RPS8
Ribosomal protein S8.
    
 0.988
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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