Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001906annotation not available (783 aa)    
Predicted Functional Partners:
ENSVPAP00000001121
annotation not available
 
  
 0.946
MON2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
   
 
 0.865
TMEM30A
Transmembrane protein 30A.
    
 
 0.737
DOP1A
DOP1 leucine zipper like protein A.
   
 
 0.694
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.686
ATP11C
ATPase phospholipid transporting 11C.
 
 
0.670
ENSVPAP00000001139
annotation not available
      
 0.648
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.618
ENSVPAP00000010619
annotation not available
   
  
 0.617
ENSVPAP00000010225
annotation not available
      
 0.615
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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