Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP153Nucleoporin 153. (1474 aa)    
Predicted Functional Partners:
NUP50
Nucleoporin 50.
   
 0.999
NUP43
Nucleoporin 43.
    
 0.999
NUP98
Nucleoporin 98.
   
 0.999
TPR
Translocated promoter region, nuclear basket protein.
   
 0.999
RANBP2
RAN binding protein 2.
   
 0.999
NUP85
Nucleoporin 85.
    
 0.999
NUP88
Nucleoporin 88.
   
 0.999
NUP107
Nucleoporin 107.
   
 0.998
NUP93
Nucleoporin 93.
    
 0.998
NUP214
Nucleoporin 214.
   
 0.998
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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