STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMYM2Zinc finger MYM-type containing 2. (1369 aa)    
Predicted Functional Partners:
MPHOSPH8
M-phase phosphoprotein 8.
   
 0.879
UBAP2
Ubiquitin associated protein 2.
    
 
 0.857
ENSVPAP00000002748
annotation not available
    
 
 0.843
KDM1A
Lysine demethylase 1A.
    
 
 0.836
ZNF451
Zinc finger protein 451.
   
 0.804
ENSVPAP00000005950
annotation not available
    
 0.789
CENPJ
Centromere protein J.
    
 0.779
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.776
ENSVPAP00000008216
annotation not available
   
 0.765
HDAC2
Histone deacetylase 2.
    
 
 0.764
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.