Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DOCK4Dedicator of cytokinesis 4. (1869 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
ENSVPAP00000000526
annotation not available
   
 0.998
RPL29
Ribosomal protein L29.
   
 0.998
ENSVPAP00000005525
annotation not available
   
 0.998
RPL21
Ribosomal protein L21.
   
 0.998
RPL13A
Ribosomal protein L13a.
  
 0.998
ENSVPAP00000006149
annotation not available
  
 0.998
RPL6
Ribosomal protein L6.
  
 0.998
RPL30
Ribosomal protein L30.
   
 0.998
RPL3
Ribosomal protein L3.
  
 0.998
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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