Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFRD1Interferon related developmental regulator 1. (419 aa)    
Predicted Functional Partners:
COMMD10
COMM domain containing 10.
   
 0.956
COMMD2
COMM domain containing 2.
    
 0.943
COMMD6
COMM domain containing 6.
    
 0.942
COMMD1
Copper metabolism domain containing 1.
   
 0.939
UBXN7
UBX domain protein 7.
     
  0.938
ENSVPAP00000009221
annotation not available
   
 0.901
VPS29
VPS29 retromer complex component.
    
 
 0.818
ANKMY2
Ankyrin repeat and MYND domain containing 2.
    
 0.810
RPS27A
Ribosomal protein S27a.
    
  0.760
ENSVPAP00000001314
annotation not available
    
 0.755
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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