Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R3AProtein phosphatase 1 regulatory subunit 3A. (1106 aa)    
Predicted Functional Partners:
GYS2
Glycogen synthase 2.
   
 0.988
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.986
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
 0.968
PPP1R3C
Protein phosphatase 1 regulatory subunit 3C.
     
0.966
ENSVPAP00000007111
annotation not available
    
 0.939
C12orf66
Chromosome 12 open reading frame 66.
    
 0.938
RPS6KA6
Ribosomal protein S6 kinase A6.
    
  0.911
RPS6KA3
Ribosomal protein S6 kinase A3.
    
  0.911
ENSVPAP00000001323
annotation not available
    
 0.851
ENSVPAP00000000316
annotation not available
   
 0.828
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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