Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EBNA1BP2EBNA1 binding protein 2. (237 aa)    
Predicted Functional Partners:
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.998
MAK16
MAK16 homolog.
   
 0.997
NOP56
NOP56 ribonucleoprotein.
   
 
 0.997
ENSVPAP00000006861
annotation not available
   
 0.997
RPF2
Ribosome production factor 2 homolog.
   
 
 0.997
PUM3
Pumilio RNA binding family member 3.
   
 
 0.997
RPF1
Ribosome production factor 1 homolog.
   
 0.996
NEXN
Nexilin F-actin binding protein.
   
 
 0.995
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.995
WDR12
WD repeat domain 12.
   
 0.995
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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