Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PROM1Prominin 1. (848 aa)    
Predicted Functional Partners:
TSG101
Tumor susceptibility 101.
    
 
 0.816
FGFBP1
Fibroblast growth factor-binding protein 1.
      
 0.814
CD34
CD34 molecule.
      
 0.752
ENSVPAP00000010014
annotation not available
  
   
 0.716
CD44
CD44 molecule (Indian blood group).
      
 0.691
EPCAM
Epithelial cell adhesion molecule.
   
  
 0.688
ENSVPAP00000005374
annotation not available
      
 0.684
ENSVPAP00000000643
annotation not available
      
 0.683
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.677
ENSVPAP00000005383
annotation not available
      
 0.664
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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