Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAPT1Transmembrane anterior posterior transformation 1. (457 aa)    
Predicted Functional Partners:
SUCO
SUN domain containing ossification factor.
    
 
 0.918
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
      
 0.685
HAUS3
HAUS augmin like complex subunit 3.
      
 0.665
TBCCD1
TBCC domain containing 1.
      
 0.622
RIC3
RIC3 acetylcholine receptor chaperone.
    
   0.620
ENSVPAP00000009687
annotation not available
      
 0.615
ENSVPAP00000011623
annotation not available
      
 0.615
RAB14
RAB14, member RAS oncogene family.
      
 0.612
ENSVPAP00000011109
annotation not available
      
 0.610
NSUN7
NOP2/Sun RNA methyltransferase family member 7.
      
 0.602
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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